AT4G21400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 28 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (CRK28); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 113926 Blast hits to 112559 proteins in 4362 species: Archae - 99; Bacteria - 12248; Metazoa - 42120; Fungi - 9484; Plants - 33287; Viruses - 404; Other Eukaryotes - 16284 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:11399218..11401709 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79048.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEHVRVIFFF FACVLKIVPF ICLAQKDKYE FPPGFNCVAS GGNFTANSSF AGNLNGLVSS LSSLTSKPYG FYNLSSGDSS GERAYAIGLC RREVKRDDCL 101: SCIQIAARNL IEQCPLTNQA VVWYTHCMFR YSNMIIYGRK ETTPTLSFQA GKNISANRDE FDRLQIELLD RLKGIAAAGG PNRKYAQGSG SGVAGYPQFY 201: GSAHCTPDLS EQDCNDCLVF GFEKIPGCCA GQVGLRWFFP SCSYRFETWR FYEFDADLEP DPPAIQPADS PTSAARTERT GKGKGGSKVI VAIVIPIVFV 301: ALFAICLCLL LKWKKNKSVG RVKGNKHNLL LLVIVILLQK DEFSDSLVVD FETLKAATDN FSPENELGRG GFGSVYKGVF SGGQEIAVKR LSCTSGQGDS 401: EFKNEILLLA KLQHRNLVRL LGFCIEGQER ILVYEFIKNA SLDNFIFGNC FPPFSPYDDP TVLFFLLCVD LYAVTDLKKR QLLDWGVRYK MIGGVARGLL 501: YLHEDSRYRI IHRDLKASNI LLDQEMNPKI ADFGLAKLYD TDQTSTHRFT SKIAGTYGYM APEYAIYGQF SVKTDVFSFG VLVIEIITGK GNNNGRSNDD 601: EEAENLLSWV WRCWREDIIL SVIDPSLTTG SRSEILRCIH IGLLCVQESP ASRPTMDSVA LMLNSYSYTL PTPSRPAFAL ESVMPSMNVS SSTEPLLMSL 701: NDVTVSELSP R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)