AT4G21320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.526 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aldolase-type TIM barrel family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
HEAT-STRESS-ASSOCIATED 32 (HSA32); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to heat, heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), (2R)-phospho-3-sulpholactate synthase, ComA (InterPro:IPR003830), Peptidase S8, subtilisin-related (InterPro:IPR015500); Has 279 Blast hits to 279 proteins in 109 species: Archae - 46; Bacteria - 111; Metazoa - 0; Fungi - 36; Plants - 41; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11340492..11341732 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32642.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.94 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||
| Length | 286 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAYYRWKSF EENEDRPEKP RRYGVTEMRG PHYSVLSQNL LQEIFESMGQ FVDGLKFSGG SNSLIPKSFI KQAIEMAHEH GVYVSTGDWA EHMLRSGPSA 101: FKDYVEECKQ LGFDTIELNA NLLEVPEETL LRYVRLIKNG GLRAKPMFAV KFNKSDIPGR NRAFGSYVVP EPRSSEFVED IDLLIRKAER CLEAGADTIM 201: IDADDVCKYA DSLRADIIAK VIGRLGIEKT MFEASDAKLV EWFIKRYGPN VNLYVDHSQI MDLECLRGRH LGKDHQSVLS SSYFLF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)