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AT4G16500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23738689 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:22550958 (2012): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:21109274 (2011): extracellular region
  • PMID:16729891 (2006): extracellular region
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cystatin/monellin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cystatin/monellin superfamily protein; FUNCTIONS IN: enzyme regulator activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT5G47550.1); Has 714 Blast hits to 692 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioGrid:12641eggNOG:ENOG410JWRDeggNOG:ENOG41104PREMBL:AL161544
EMBL:AY087123EMBL:BT002775EMBL:BT020289EMBL:BT020314
EMBL:BT025593EMBL:CP002687EMBL:Z97341EnsemblPlants:AT4G16500
EnsemblPlants:AT4G16500.1entrez:827348GeneID:827348Genevisible:Q84WT8
GO:GO:0004869GO:GO:0005576GO:GO:0005618GO:GO:0005773
GO:GO:0005829GO:GO:0006952GO:GO:0009506Gramene:AT4G16500.1
hmmpanther:PTHR11413HOGENOM:HOG000238371InParanoid:Q84WT8InterPro:IPR000010
InterPro:IPR020381InterPro:IPR027214iPTMnet:Q84WT8KEGG:ath:AT4G16500
MEROPS:I25.033OMA:KYDLKIAPANTHER:PTHR11413PaxDb:Q84WT8
Pfam:PF16845Pfam:Q84WT8PhylomeDB:Q84WT8PIR:H71431
PRIDE:Q84WT8PRO:PR:Q84WT8ProDom:PD001231ProteinModelPortal:Q84WT8
Proteomes:UP000006548RefSeq:NP_193383.1SMART:SM00043SMR:Q84WT8
STRING:3702.AT4G16500.1SUPFAM:SSF54403TAIR:AT4G16500TMHMM:TMhelix
UniGene:At.33073UniProt:Q84WT8
Coordinates (TAIR10) chr4:-:9301530..9301883
Molecular Weight (calculated) 12556.60 Da
IEP (calculated) 9.72
GRAVY (calculated) 0.14
Length 117 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMKSLICLS LILLPLVSVV EGLGGGGGLG SRKPIKNVSD PDVVAVAKYA IEEHNKESKE KLVFVKVVEG TTQVVSGTKY DLKIAAKDGG GKIKNYEAVV
101: VEKLWLHSKS LESFKAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)