AT4G16140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proline-rich family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
proline-rich family protein; Has 22415 Blast hits to 11533 proteins in 665 species: Archae - 22; Bacteria - 2059; Metazoa - 8248; Fungi - 2655; Plants - 6106; Viruses - 637; Other Eukaryotes - 2688 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9129046..9129540 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 17966.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.73 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||
| Length | 164 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METFRTFHLF LFFFFFTFTT TLTSPSQIAD CTMCTSCDNP CQPNPSPPPP PSNPSPPPPS PTTTACPPPP SSSGGGPYYY YPPASQSGSY RPPPSSSSGG 101: YYYPPPKSGG NYPYTPPPNP IVPYFPFYYY NPPPQSVMSG SDAKIRFSYG VSFILIFSLY FGCF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)