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AT4G14305.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111SYHeggNOG:KOG1944EMBL:AK222097EMBL:CP002687
EMBL:DQ487599EnsemblPlants:AT4G14305EnsemblPlants:AT4G14305.1entrez:3770487
ExpressionAtlas:Q56WE5GeneID:3770487GO:GO:0016021Gramene:AT4G14305.1
hmmpanther:PTHR11266hmmpanther:PTHR11266:SF15HOGENOM:HOG000238919InterPro:IPR007248
KEGG:ath:AT4G14305KO:K13347OMA:ASCWAIFPANTHER:PTHR11266
Pfam:PF04117PhylomeDB:Q56WE5Proteomes:UP000006548RefSeq:NP_001031637.1
TAIR:AT4G14305TMHMM:TMhelixUniGene:At.63304UniProt:Q56WE5
Coordinates (TAIR10) chr4:-:8235335..8236605
Molecular Weight (calculated) 21210.30 Da
IEP (calculated) 10.81
GRAVY (calculated) 0.11
Length 185 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDLAKDAWR KYLIQLQAHP LRTKAITAGV LAGCSDAIAQ KISGVKRIQF RRLLLLMLYG FAYGGPFGHF FHKLMDTIFK GKKGNSTVAK KVLLEQLTSS
101: PWNNFLFMSY YGLVVEGRPW KLVKHKLGKD YPTIQLTAWK FWPIVGWVNY QYVPLQFRVL FSSFVASCWS IFLNLKARSP VIKNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)