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AT4G11800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFVAeggNOG:ENOG410XT8BEMBL:CP002687EnsemblPlants:AT4G11800
EnsemblPlants:AT4G11800.1entrez:826786Gene3D:3.60.21.10GeneID:826786
GO:GO:0016021GO:GO:0016787Gramene:AT4G11800.1hmmpanther:PTHR34211
hmmpanther:PTHR34211:SF2InParanoid:F4JPS4InterPro:IPR004843InterPro:IPR029052
iPTMnet:F4JPS4KEGG:ath:AT4G11800OMA:NCAVLSMPaxDb:F4JPS4
Pfam:PF00149PRIDE:F4JPS4ProteinModelPortal:F4JPS4Proteomes:UP000006548
RefSeq:NP_192917.3SUPFAM:SSF56300TAIR:AT4G11800TMHMM:TMhelix
UniGene:At.46242UniProt:F4JPS4
Coordinates (TAIR10) chr4:-:7093666..7098519
Molecular Weight (calculated) 116570.00 Da
IEP (calculated) 8.09
GRAVY (calculated) 0.04
Length 1013 amino acids
Sequence (TAIR10)
(BLAST)
0001: MVSERHSARL YNSLPMESFR TILTHTYPYP HEHSRHAIIA VLFGCLFFIS SDNMQTLIEK FSVKWWSMYA CLLGFFYFFS SPFIQKTIRP NYSNFSRWYI
0101: AWILVAALYH LPNFQSMGLD LRMNLSLFLT IYISSILFLV VFHIIFLGLW YVGLVSRVAG RRPEILTILQ NCAVLSMACC IFYSHCGNRA VLRQKPLGRQ
0201: YTSWFSFWKR EHRHNTWLAK FIRMNELKDQ VCSSWFAPVG SASDYPLLSK WFIYGEIACN GSCPDSADEI SPIYSLWATF IGLYIANYVV ERSTGWALTH
0301: PLSVDKYEKL KNQQLKPDFL DMVPWYSGTS ADLFKTVFDL LVSVTVFLGR FDMRMLQAAM TKSGDASGRK ELLYDHLAEK QDFWFDFMAD TGDGGNSSYS
0401: VAKLLAQPSL RVPVANNFIS LPRGNVLLIG GDLAYPNPSS FTYEKRLFCP FEYALQPPRW YKNDSIAVDK PELPNGVSDL KSYEGPQCFL IPGNHDWFDG
0501: LNTFMRYICH KSWLGGWLMP QKKSYFALQL PKGWWVFGLD LALHGDIDVD QFKFFSELVK DKVGESDAVI IITHEPNWLL DWYWSGDTGQ NVRHLICDVL
0601: KYRCKLRMAG DLHHYMRHSC NQSDGPAHVQ HLLVNGCGGA FLHPTHVFSK FSKFYGASYG SKVAYPSFDD SSKIALGNIL KFRKKNWQFD FIGGIIYFIL
0701: VFSLFPQCKL AHVLRGDSFS GHLESFLGTV WSAFAYVMEQ SYVSFTGVLM LLITAITFVP SKVSLKKRVV IGVLHVAAHL MAALILMLML ELGIEICIQH
0801: NLLANSGYHT LYEWYKSVEN EHFPDPTGLR ARIEQWTFGL YPACIKYLMS AFDVPEVMAV TRTNICKHGM ESLSRSGAVI YYASVFLYFW VFSTPVVSMV
0901: FGSYLYICIN WFHIHFDEAF SSLRIANYKS FTRFHILEDG DIEVFTLAVD KVPKDWKLDK DWDSEPKQSF KMSYEREFPS KWGASTSQQD PVNTVKIVDR
1001: FVIHRSQKEN GEC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)