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AT4G05100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : myb domain protein 74
Curator
Summary (TAIR10)
Member of the R2R3 factor gene family.
Computational
Description (TAIR10)
myb domain protein 74 (MYB74); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: MYB-like 102 (TAIR:AT4G21440.1); Has 9090 Blast hits to 8399 proteins in 548 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 491; Plants - 5947; Viruses - 4; Other Eukaryotes - 1832 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5147eggNOG:KOG0048EMBL:AF386932EMBL:AL161502
EMBL:BT001182EMBL:CP002687EnsemblPlants:AT4G05100EnsemblPlants:AT4G05100.1
entrez:825855Gene3D:1.10.10.60GeneID:825855GO:GO:0003677
GO:GO:0003700GO:GO:0006355GO:GO:0009651GO:GO:0009723
GO:GO:0009737GO:GO:0009753Gramene:AT4G05100.1hmmpanther:PTHR10641
hmmpanther:PTHR10641:SF586InterPro:IPR001005InterPro:IPR009057InterPro:IPR017930
KEGG:ath:AT4G05100KO:K09422OMA:CCEKKNGPfam:PF00249
Pfscan:PS51294PhylomeDB:Q9M0Y5PIR:B85064PROSITE:PS51294
Proteomes:UP000006548RefSeq:NP_192419.1SMART:SM00717SMR:Q9M0Y5
STRING:3702.AT4G05100.1SUPFAM:SSF46689TAIR:AT4G05100tair10-symbols:AtMYB74
tair10-symbols:MYB74UniGene:At.10920UniProt:Q9M0Y5
Coordinates (TAIR10) chr4:+:2618557..2619790
Molecular Weight (calculated) 37398.60 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.83
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRSPCCEKK NGLKKGPWTP EEDQKLIDYI NIHGYGNWRT LPKNAGLQRC GKSCRLRWTN YLRPDIKRGR FSFEEEETII QLHSIMGNKW SAIAARLPGR
101: TDNEIKNYWN THIRKRLLKM GIDPVTHTPR LDLLDISSIL SSSIYNSSHH HHHHHQQHMN MSRLMMSDGN HQPLVNPEIL KLATSLFSNQ NHPNNTHENN
201: TVNQTEVNQY QTGYNMPGNE ELQSWFPIMD QFTNFQDLMP MKTTVQNSLS YDDDCSKSNF VLEPYYSDFA SVLTTPSSSP TPLNSSSSTY INSSTCSTED
301: EKESYYSDNI TNYSFDVNGF LQFQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)