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AT1G05100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.547
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitogen-activated protein kinase kinase kinase 18
Curator
Summary (TAIR10)
member of MEKK subfamily
Computational
Description (TAIR10)
mitogen-activated protein kinase kinase kinase 18 (MAPKKK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 17 (TAIR:AT2G32510.1); Has 120072 Blast hits to 118882 proteins in 4556 species: Archae - 119; Bacteria - 13343; Metazoa - 45257; Fungi - 11715; Plants - 30592; Viruses - 483; Other Eukaryotes - 18563 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G05100-MONOMEReggNOG:ENOG410XQGSeggNOG:KOG0198EMBL:AC005322
EMBL:AY064039EMBL:AY091011EMBL:BT004419EMBL:CP002684
EnsemblPlants:AT1G05100EnsemblPlants:AT1G05100.1entrez:839324GeneID:839324
GO:GO:0004674GO:GO:0005524GO:GO:0005737GO:GO:0007346
GO:GO:0023014GO:GO:0031098GO:GO:0032147Gramene:AT1G05100.1
hmmpanther:PTHR24361hmmpanther:PTHR24361:SF380HOGENOM:HOG000234203InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G05100
OMA:MFWRSVEPfam:PF00069Pfscan:PS50011PhylomeDB:Q9ZVP5
PIR:C86185PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548Reactome:R-ATH-2559580RefSeq:NP_172003.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9ZVP5STRING:3702.AT1G05100.1
SUPFAM:SSF56112TAIR:AT1G05100tair10-symbols:MAPKKK18UniGene:At.27059
UniProt:Q9ZVP5
Coordinates (TAIR10) chr1:+:1469679..1470698
Molecular Weight (calculated) 37744.40 Da
IEP (calculated) 4.71
GRAVY (calculated) -0.35
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MNWTRGKTLG RGSTATVSAA TCHESGETLA VKSAEFHRSE FLQREAKILS SLNSPYVIGY RGCEITREPF HNNGEATTYS LLMEYAPYGT LTDVATKNGG
101: FIDEARVVKY TRQILLGLEY IHNSKGIAHC DIKGSNVLVG ENGEAKIADF GCAKWVEPEI TEPVRGTPAF MAPEAARGER QGKESDIWAV GCTVIEMVTG
201: SQPWIGADFT DPVSVLYRVG YLGELPELPC SLTEQAKDFL GKCLKKEATE RWTASQLLNH PFLVNKEPEL VTGLVTNSPT SVTDQMFWRS VEEEVSEDRS
301: SWWECHEDER IGVLSWIGHV VVESTWDLDG EDWITVRRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)