AT4G01590.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.998 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35680.1); Has 1908 Blast hits to 1345 proteins in 175 species: Archae - 3; Bacteria - 106; Metazoa - 494; Fungi - 346; Plants - 115; Viruses - 71; Other Eukaryotes - 773 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:689077..690192 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23136.30 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 4.25 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -1.25 | ||||||||||||||||||||||||||||||||
Length | 200 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSWKGARGKP KGYGGDYGKP EPFVIFPEIT LPDPKSISTD SQLVQSYFTF NKFWRNSPYH LGDGGVSKKE KESLNIERYS DSLKPKMKSN KNGSFFDFLV 101: LRPDNFPKEL LGDTRREQRP VKRAKWSQEA DLQKLDVFEK LEAKFKVEGK EEKEEGEDDE EVVESEGEES DNGDYDQNQD FDDDDDDYNN EDDGLVEEVY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)