AT4G00910.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.699 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Aluminium activated malate transporter family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 1015 Blast hits to 1014 proteins in 357 species: Archae - 0; Bacteria - 624; Metazoa - 0; Fungi - 16; Plants - 351; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:389370..391287 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55519.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.61 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||
| Length | 497 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATQEAGKLE WRISVDNGTT ERLVPRSGLS KRIFLWLKDL VMKVIMERVA KFMRKAWRIG ADDPAKVVHC LKVGLALSLV SIFYYMRPLY DGVGGNAMWA 101: IMTVVVVFES NVGATFCKCV NRVVATILAG SLGIAVHWVA TQSGKAEVFV IGCSVFLFAF AATYSRFVPS FKARFDYGAM IFILTFSLVS VGGYRVDKLV 201: ELAQQRVSTI AIGTSICIII TVFFCPIWAG SQLHRLIERN LEKLADSLDG CVAEYFKENE VSTNRNEDEN TNMKLQGFKC VLNSKGTEEA MPLIRFSGFS 301: FSQANLARWE PAHGSFNFRH PWKLYVKIGA AMRRCAYCLE NLSICINYET EAPDQVKNHF GEACMKLSSA SSKILRELAD MMKNTRKSSK MDFLVFDMNS 401: AVQELQETLK NVPIETNKPE EVPSEEENKV DSEERTTSMS LHEVLPVATL VSLLIENAAR IQTAVEAVDE LANLADFEQD SKKKTGDNNT KQPPLSS |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)