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AT4G00525.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J4EHeggNOG:ENOG410ZEMREMBL:BT015143EMBL:BT015659
EMBL:CP002687EnsemblPlants:AT4G00525EnsemblPlants:AT4G00525.1entrez:827974
GeneID:827974Gramene:AT4G00525.1hmmpanther:PTHR36045hmmpanther:PTHR36045:SF1
HOGENOM:HOG000090439KEGG:ath:AT4G00525ncoils:CoilOMA:NAANIPK
PhylomeDB:Q6AWV5Proteomes:UP000006548RefSeq:NP_680547.2TAIR:AT4G00525
UniGene:At.45470UniGene:At.50859UniProt:Q6AWV5
Coordinates (TAIR10) chr4:+:231862..232769
Molecular Weight (calculated) 15876.90 Da
IEP (calculated) 4.57
GRAVY (calculated) -0.64
Length 140 amino acids
Sequence (TAIR10)
(BLAST)
001: MESMASDPEL DMDEGDLEKL ESDVKQMAKK ISEYRQTLPD HLRNTLDSAL SSHIPVFPNI DSGSDPLPSS CLTIAEAQVP GVLEEQDSEE KWIQLKERMS
101: RNAANIPKVV KRMRECIESI DKLDSLEVTI HPAFKRQRIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)