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AT3G63410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid envelope plastid inner membrane
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22923678 (2012): plastid
  • PMID:22550958 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid envelope
  • PMID:15028209 (2004): plastid
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.
Computational
Description (TAIR10)
ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink).
Protein Annotations
BioGrid:10830BRENDA:2.1.1.295EC:2.1.1.295eggNOG:COG0500
eggNOG:ENOG410ITIHEMBL:AB054257EMBL:AK316671EMBL:AL163818
EMBL:AY085864EMBL:BT025886EMBL:CP002686EnsemblPlants:AT3G63410
EnsemblPlants:AT3G63410.1entrez:825516Gene3D:3.40.50.150GeneID:825516
Genevisible:Q9LY74GO:GO:0008757GO:GO:0009507GO:GO:0009536
GO:GO:0009706GO:GO:0009941GO:GO:0010189GO:GO:0010236
GO:GO:0016021GO:GO:0051741Gramene:AT3G63410.1gramene_pathway:1.1.1.-
gramene_pathway:2.1.1.-gramene_pathway:PWY-1422gramene_pathway:PWY-1581gramene_plant_reactome:1119287
gramene_plant_reactome:6874066hmmpanther:PTHR10108hmmpanther:PTHR10108:SF904HOGENOM:HOG000244176
InParanoid:Q9LY74InterPro:IPR013216InterPro:IPR029063InterPro:IPR031164
iPTMnet:Q9LY74KEGG:00130+2.1.1.295KEGG:ath:AT3G63410KO:K12502
OMA:WFKNAGFPaxDb:Q9LY74Pfam:PF08241Pfam:Q9LY74
Pfscan:PS51734PhylomeDB:Q9LY74PIR:T49182PRIDE:Q9LY74
PRO:PR:Q9LY74PROSITE:PS51734ProteinModelPortal:Q9LY74Proteomes:UP000006548
RefSeq:NP_191900.1SMR:Q9LY74STRING:3702.AT3G63410.1SUPFAM:SSF53335
TAIR:AT3G63410tair10-symbols:APG1tair10-symbols:E37tair10-symbols:IEP37
tair10-symbols:VTE3TMHMM:TMhelixUniGene:At.48806UniGene:At.69648
UniPathway:UPA00160UniProt:Q9LY74
Coordinates (TAIR10) chr3:-:23415816..23417002
Molecular Weight (calculated) 37928.70 Da
IEP (calculated) 9.52
GRAVY (calculated) -0.27
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLMLNGAI TFPKGLGSPG SNLHARSIPR PTLLSVTRTS TPRLSVATRC SSSSVSSSRP SAQPRFIQHK KEAYWFYRFL SIVYDHVINP GHWTEDMRDD
101: ALEPADLSHP DMRVVDVGGG TGFTTLGIVK TVKAKNVTIL DQSPHQLAKA KQKEPLKECK IVEGDAEDLP FPTDYADRYV SAGSIEYWPD PQRGIREAYR
201: VLKIGGKACL IGPVYPTFWL SRFFSDVWML FPKEEEYIEW FKNAGFKDVQ LKRIGPKWYR GVRRHGLIMG CSVTGVKPAS GDSPLQLGPK EEDVEKPVNN
301: PFSFLGRFLL GTLAAAWFVL IPIYMWIKDQ IVPKDQPI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)