AT3G61080.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructosamine/Ketosamine-3-kinase (InterPro:IPR016477), Protein kinase-like domain (InterPro:IPR011009); Has 2101 Blast hits to 2101 proteins in 833 species: Archae - 8; Bacteria - 1432; Metazoa - 140; Fungi - 164; Plants - 42; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:22607152..22608883 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 36473.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.00 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 326 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAVASLSICF SARPHLLLRN FSPRPKFVAM AAMSEDPIRE WILTEGKATQ ITKIGSVGGG CINLASHYQT DAGSFFVKTN RSIGPAMFEG EALGLEAMYE 101: TRTIRVPNPH KAGELPTGGS YIIMEFIDFG GSRGNQAELG RKLAEMHKAG KTSKGFGFEV DNTIGSTPQI NTWSSDWIEF YGEKRLGYQL KLARDQYGDS 201: AIYQKGHTLI QNMAPLFENV VIEPCLLHGD LWSGNIAYDK NNEPVILDPA CYYGHNEADF GMSWCAGFGE SFYNAYFKVM PKQAGYEKRR DLYLLYHYLN 301: HYNLFGSGYR SSAMSIIDDY LRMLKA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)