AT3G59640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycine-rich protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43630.1); Has 114 Blast hits to 114 proteins in 30 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 4; Plants - 60; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22029101..22030300 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27139.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.78 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSTQANLCR PSLFCARTTQ TRHVSSAPFM SSLRFDYRPL PKLAIRASAS SSMSSQFSPL QNHRCRNQRQ GPVVCLLGGK DKSNGSNELS STWEAIEKAM 101: GKKSVEDMLR EQIQKKDTGG IPPRGRGGGG GGRNGGNNGS GGSSGEDGGL ASFGDETLQV VLATLGFIFL YFYIINGEEL FRLARDYIRY LIGRPKSVRL 201: TRVMEGWSRF FEKMSRKKVY NEYWLKIKRS STSLPGLVTR ANTNAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)