AT3G54600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G38860.2); Has 5251 Blast hits to 3173 proteins in 1205 species: Archae - 295; Bacteria - 4620; Metazoa - 9; Fungi - 11; Plants - 126; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:20211048..20212876 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43144.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.65 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 399 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSMAQKSVL MLCGEFMEAY ETIVPLYVLQ AFGVSVHCVS PGRKTGDKCV MAAHDLLGLE IYTELVVDHL TLNANFDGVI PDQYDAIIIP GGRFTELLSA 101: DEKCVSLVAR FAELKKLIFT SCHSQLFLAA AGLLTGGMKC TAFESMKPFI ELSGGAWWQQ PGVQTLFEIT DCVKDGSFMS TMGWPTLGHS LKVLLESLGS 201: KISSSKENHQ TSLLFLIGDC VEDYSINVPF KAFQALGCKV DAVTPTKKRG EKCATIVHDL EDGRQLPTEK FGHNFYVTVA WDDVSVDDYD CIVVPGGRSP 301: ELLVMNPKAV ELVRKFVEKG KFVAAIGMGN WLLAATGALK KKRCASSYGT KVAVKVAGGE IVESERCVTD DKLVTAASTS DLPAFLYALS TALGLSVVF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)