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AT3G29670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, inflorescence meristem, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G29635.1); Has 2351 Blast hits to 2335 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 39; Plants - 2308; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G29670-MONOMERBioCyc:MetaCyc:AT3G29670-MONOMERDNASU:822645EC:2.3.1.-
eggNOG:ENOG410IISUeggNOG:ENOG410ZBAMEMBL:AB028618EMBL:AK118746
EMBL:BT006030EMBL:CP002686EnsemblPlants:AT3G29670EnsemblPlants:AT3G29670.1
entrez:822645Gene3D:3.30.559.10GeneID:822645Genevisible:Q9LRQ8
GO:GO:0009636GO:GO:0050736Gramene:AT3G29670.1hmmpanther:PTHR31625
hmmpanther:PTHR31625:SF5HOGENOM:HOG000237788InParanoid:Q9LRQ8InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT3G29670OMA:GHITWEPPaxDb:Q9LRQ8
Pfam:PF02458Pfam:Q9LRQ8PhylomeDB:Q9LRQ8PRIDE:Q9LRQ8
PRO:PR:Q9LRQ8ProteinModelPortal:Q9LRQ8Proteomes:UP000006548RefSeq:NP_189609.1
SMR:Q9LRQ8SUPFAM:SSF52777TAIR:AT3G29670UniGene:At.36882
UniProt:Q9LRQ8
Coordinates (TAIR10) chr3:+:11527952..11529307
Molecular Weight (calculated) 50220.20 Da
IEP (calculated) 6.14
GRAVY (calculated) -0.05
Length 451 amino acids
Sequence (TAIR10)
(BLAST)
001: MTLHVIETAR VTPTDYSVIN SANLHKLPLT FFDLPWLLFQ PVKRVFFYEL TESTRDHFHS IILPKLKDSL SLILRNYLPL TGHITWEPNE PKPSIIVSEN
101: GVVLVTIAES DADFSHLSGY GQRPLSELHA LVPKLPVSDD SATAFSIQIT LFPNQGFSIG VAAHHAVLDG KTSSTFIKAW AQICKQELQS MPENLTPSYD
201: RSLIKYPTYL DEKMIELVRS LKEDQTNIRS LTSLPSSKLG DDVVLATLVL SRADIERLRE QVKNVSPSLH LSTFVIAYAY AWTCFVKARG GNKDRSVSLL
301: FVGDFRDRLD PKLPGTYFGN CMIPVGCYNR KAAEFMEEKG FVTAAEIISD LVKGLSSRKI ETIADTFVEG FSFQSWSTQF GTIAGSTRLG VYEADFGWGR
401: PVKVDIVSID QGEAIAMAER RDESGGVEIG MCLKKTEMDS VVSFFNNGLH S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)