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AT3G24515.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ubiquitin-conjugating enzyme 37
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ubiquitin-conjugating enzyme 37 (UBC37); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 11 (TAIR:AT3G08690.2); Has 10163 Blast hits to 10152 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4605; Fungi - 2137; Plants - 1818; Viruses - 27; Other Eukaryotes - 1574 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G24515-MONOMEREC:2.3.2.23eggNOG:COG5078eggNOG:KOG0417
EMBL:AB020746EMBL:AY052292EMBL:AY061922EMBL:CP002686
EMBL:DQ027050EnsemblPlants:AT3G24515EnsemblPlants:AT3G24515.1entrez:822045
Gene3D:3.10.110.10GeneID:822045Genevisible:Q941B6GO:GO:0000209
GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0006974
GO:GO:0031625GO:GO:0061630Gramene:AT3G24515.1hmmpanther:PTHR24067
hmmpanther:PTHR24067:SF59HOGENOM:HOG000185102InParanoid:Q941B6InterPro:IPR000608
InterPro:IPR016135InterPro:IPR023313KEGG:ath:AT3G24515KO:K13960
OMA:SDPPHGAPaxDb:Q941B6Pfam:PF00179Pfam:Q941B6
Pfscan:PS50127PRIDE:Q941B6PRO:PR:Q941B6PROSITE:PS00183
PROSITE:PS50127ProteinModelPortal:Q941B6Proteomes:UP000006548RefSeq:NP_566751.1
scanprosite:PS00183SMR:Q941B6STRING:3702.AT3G24515.1SUPFAM:SSF54495
TAIR:AT3G24515tair10-symbols:UBC37UniGene:At.26504UniPathway:UPA00143
UniProt:Q941B6
Coordinates (TAIR10) chr3:-:8934569..8936207
Molecular Weight (calculated) 45085.30 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.68
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQAARLSLR MQKELKLLLS DPPHGASFPH LSSAANGSGD FSTFSTIDAQ IEGPEDTVYA NGIFNLKIQI PERYPFQPPI VSFATPIYHP NIDNSGRICL
101: DILNLPPKGA WQPSLNISTV LTSMRLLLSE PNPDDGLMCE VSREYKYNRQ TFDYKAREMT EKYAKVKADG CSTSLQIKNH GDEKSGESGN SVKLKLTVES
201: SLSIAHTVKR ETAGRDEQED GNGKRKAVVG FGEGNSFGND GIKRSRKKLS LALPSQSQKK DLCGEEELTR GVSAACKENK KPNLNGKKLS LGLKQPCNDT
301: LASFRTSAAK SDNNRLSRKL SLRSPLGELN EVSKPEVLAQ TDMKLEMNQN EDARSLRGEF ENSVLEETSM AESIVVLDSD DSGQEEEERV SSSRSRLSLA
401: KRRVLKCRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)