AT3G23930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8647028..8647775 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 27000.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.16 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.16 | ||||||||||||||||||||||||
| Length | 224 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGCTSKQER RGVRSVKETS KDQSRGRRHL IKERDEREKV MFLQLKEAER EWRKERKKLR EEVRRLRKKL EEREEAKTTT TEEREYWKWV VEEMCVERAV 101: RDEAVEKWKQ LYLAIKNELD HLISHTTSSS GEAIMQRKLE EQEEEETEAK RVEVLRDEVR VKEETVETLE EQIVLMDRQK YEKEREIDLL RQSLRILGSK 201: KKKKTGSFAS MNLLILKTKC VECT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)