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AT3G21460.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15700.1); Has 1364 Blast hits to 1360 proteins in 220 species: Archae - 0; Bacteria - 35; Metazoa - 262; Fungi - 243; Plants - 766; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Protein Annotations
BioGrid:624229eggNOG:COG0695eggNOG:KOG1752EMBL:AP001305
EMBL:CP002686EMBL:DQ487674EMBL:DQ652772EMBL:FJ611903
EnsemblPlants:AT3G21460EnsemblPlants:AT3G21460.1entrez:5008019Gene3D:3.40.30.10
GeneID:5008019GO:GO:0005634GO:GO:0005737GO:GO:0009055
GO:GO:0015035GO:GO:0045454GO:GO:0046872GO:GO:0051537
Gramene:AT3G21460.1hmmpanther:PTHR10168hmmpanther:PTHR10168:SF105HOGENOM:HOG000095204
InParanoid:Q9LIF1InterPro:IPR002109InterPro:IPR011905InterPro:IPR012336
KEGG:ath:AT3G21460OMA:GKDIEWAPaxDb:Q9LIF1Pfam:PF00462
Pfam:Q9LIF1Pfscan:PS51354PhylomeDB:Q9LIF1PRIDE:Q9LIF1
PRO:PR:Q9LIF1PROSITE:PS51354ProteinModelPortal:Q9LIF1Proteomes:UP000006548
RefSeq:NP_001078198.1SMR:Q9LIF1STRING:3702.AT3G21460.1SUPFAM:SSF52833
TAIR:AT3G21460TIGRfam:TIGR02189TIGRFAMs:TIGR02189UniGene:At.69241
UniProt:Q9LIF1
Coordinates (TAIR10) chr3:-:7557567..7557875
Molecular Weight (calculated) 11056.70 Da
IEP (calculated) 8.50
GRAVY (calculated) 0.45
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVVARLASQ RAVVIFSKST CCMSHAIKRL FYEQGVSPAI VEIDQDMYGK DIEWALARLG CSPTVPAVFV GGKFVGTANT VMTLHLNGSL KILLKEAGAL
101: WL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)