AT3G20090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.835 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 18 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 18 (CYP705A18); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, sperm cell, hypocotyl, root; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 33 (TAIR:AT3G20960.1); Has 31557 Blast hits to 31477 proteins in 1631 species: Archae - 50; Bacteria - 3287; Metazoa - 11352; Fungi - 7035; Plants - 8725; Viruses - 3; Other Eukaryotes - 1105 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7017046..7018287 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44576.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.65 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||
| Length | 386 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKIFATKLL RPQVLENSRG VRAEELKRFY RRILDKARKN ENIEISKESA MLMNNILCRM SMGRSFSEEN GEAERVRGLV GESYALVKKI FFAATLRRLL 101: EKLRIPLFRK EIMGVSDRFD ELLERIIVEH KDKLEKEHQV MDMMDVLLAA YRDKNAEYKI TRNHIKSFFV DLFVGGTDTS VQTTQWTMAE IINNPNILQT 201: LRKEIDSVVG KSRLIHETDI PNLPYLQAVV KEGLRLHPPG PLLIRTFQER CEMKGFYIPE KTTLVINAYA VMRDPDSWED PDEFKPERFL SYSRSGQEDE 301: KEQTLKYLSF GGGRRGCPGV NLGYIFVGTA IGMMVQCFDW KIEGDKVNME ETYGGMNLTM VNPLKCTPVP RTQPFSFTSN LEILSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)