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AT3G18850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.839
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lysophosphatidyl acyltransferase 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1763 Blast hits to 1758 proteins in 511 species: Archae - 0; Bacteria - 640; Metazoa - 539; Fungi - 189; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G18850-MONOMERBioCyc:ARA:GQT-2279-MONOMERBioCyc:ARA:GQT-2280-MONOMERBioCyc:ARA:GQT-2281-MONOMER
BioCyc:ARA:GQT-2282-MONOMERBRENDA:2.3.1.51EC:2.3.1.51eggNOG:COG0204
eggNOG:KOG1505EMBL:AP002039EMBL:AY099849EMBL:BT008462
EMBL:CP002686EnsemblPlants:AT3G18850EnsemblPlants:AT3G18850.1EnsemblPlants:AT3G18850.2
EnsemblPlants:AT3G18850.3EnsemblPlants:AT3G18850.4entrez:821418ExpressionAtlas:Q9LHN4
GeneID:821418Genevisible:Q9LHN4GO:GO:0003841GO:GO:0016021
GO:GO:0016024gramene_pathway:2.3.1.51gramene_pathway:PWY-5667gramene_pathway:PWY0-1319
gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR10983hmmpanther:PTHR10983:SF25HOGENOM:HOG000005662
InParanoid:Q9LHN4InterPro:IPR002123InterPro:IPR032098KEGG:00561+2.3.1.51
KEGG:00564+2.3.1.51KEGG:ath:AT3G18850KO:K13513OMA:LDNVYGI
PaxDb:Q9LHN4Pfam:PF01553Pfam:PF16076Pfam:Q9LHN4
PhylomeDB:Q9LHN4PRIDE:Q9LHN4PRO:PR:Q9LHN4ProteinModelPortal:Q9LHN4
Proteomes:UP000006548Reactome:R-ATH-1482798Reactome:R-ATH-1483166Reactome:R-ATH-75109
RefSeq:NP_001030724.2RefSeq:NP_001078183.1RefSeq:NP_188515.1RefSeq:NP_974335.1
SMART:SM00563STRING:3702.AT3G18850.1SUPFAM:0039877TAIR:AT3G18850
tair10-symbols:LPAT5TMHMM:TMhelixUniGene:At.8309UniPathway:UPA00557
UniProt:Q9LHN4
Coordinates (TAIR10) chr3:-:6499529..6500840
Molecular Weight (calculated) 43492.30 Da
IEP (calculated) 9.20
GRAVY (calculated) 0.12
Length 375 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKSVPNSD KLSLIRVLRG IICLMVLVST AFMMLIFWGF LSAVVLRLFS IRYSRKCVSF FFGSWLALWP FLFEKINKTK VIFSGDKVPC EDRVLLIANH
101: RTEVDWMYFW DLALRKGQIG NIKYVLKSSL MKLPLFGWAF HLFEFIPVER RWEVDEANLR QIVSSFKDPR DALWLALFPE GTDYTEAKCQ RSKKFAAENG
201: LPILNNVLLP RTKGFVSCLQ ELSCSLDAVY DVTIGYKTRC PSFLDNVYGI EPSEVHIHIR RINLTQIPNQ EKDINAWLMN TFQLKDQLLN DFYSNGHFPN
301: EGTEKEFNTK KYLINCLAVI AFTTICTHLT FFSSMIWFRI YVSLACVYLT SATHFNLRSV PLVETAKNSL KLVNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)