AT3G11480.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.678 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:3614544..3617137 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 43367.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 379 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDPRFINTIP SLRYDDDKCD DEYAFVKALC MSGGDGANSY SANSRLQKKV LSMAKPVLVR NTEEMMMNLD FPTYIKVAEL GCSSGQNSFL AIFEIINTIN 101: VLCQHVNKNS PEIDCCLNDL PENDFNTTFK FVPFFNKELM ITNKSSCFVY GAPGSFYSRL FSRNSLHLIH SSYALHWLSK VPEKLENNKG NLYITSSSPQ 201: SAYKAYLNQF QKDFTMFLRL RSEEIVSNGR MVLTFIGRNT LNDPLYRDCC HFWTLLSNSL RDLVFEGLVS ESKLDAFNMP FYDPNVQELK EVIQKEGSFE 301: INELESHGFD LGHYYEEDDF EAGRNEANGI RAVSEPMLIA HFGEEIIDTL FDKYAYHVTQ HANCRNKTTV SLVVSLTKK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)