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AT3G11020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DRE/CRT-binding protein 2B
Curator
Summary (TAIR10)
encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A.
Computational
Description (TAIR10)
DRE/CRT-binding protein 2B (DREB2B); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE-binding protein 2A (TAIR:AT5G05410.1); Has 5317 Blast hits to 5304 proteins in 255 species: Archae - 0; Bacteria - 10; Metazoa - 17; Fungi - 6; Plants - 5184; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXVHeggNOG:ENOG410YKCQEMBL:KC412253EnsemblPlants:AT3G11020
EnsemblPlants:AT3G11020.1entrez:820273ExpressionAtlas:M4VR86Gene3D:3.30.730.10
GeneID:820273GO:GO:0003677GO:GO:0003700GO:GO:0005634
GO:GO:0006351Gramene:AT3G11020.1hmmpanther:PTHR31241hmmpanther:PTHR31241:SF2
InterPro:IPR001471InterPro:IPR016177KEGG:ath:AT3G11020KO:K09286
OMA:CTVENKAPaxDb:M4VR86Pfam:O82133Pfam:PF00847
Pfscan:PS51032PhylomeDB:M4VR86PRINTS:PR00367PROSITE:PS51032
ProteinModelPortal:M4VR86RefSeq:NP_187713.1SMART:SM00380SMR:M4VR86
STRING:3702.AT3G11020.1SUPFAM:SSF54171tair10-symbols:DREB2tair10-symbols:DREB2B
UniGene:At.234UniProt:M4VR86UniProt:O82133
Coordinates (TAIR10) chr3:+:3456009..3457001
Molecular Weight (calculated) 37118.90 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.91
Length 330 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVYEQTGTE QPKKRKSRAR AGGLTVADRL KKWKEYNEIV EASAVKEGEK PKRKVPAKGS KKGCMKGKGG PDNSHCSFRG VRQRIWGKWV AEIREPKIGT
101: RLWLGTFPTA EKAASAYDEA ATAMYGSLAR LNFPQSVGSE FTSTSSQSEV CTVENKAVVC GDVCVKHEDT DCESNPFSQI LDVREESCGT RPDSCTVGHQ
201: DMNSSLNYDL LLEFEQQYWG QVLQEKEKPK QEEEEIQQQQ QEQQQQQLQP DLLTVADYGW PWSNDIVNDQ TSWDPNECFD INELLGDLNE PGPHQSQDQN
301: HVNSGSYDLH PLHLEPHDGH EFNGLSSLDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)