AT3G10840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3391207..3393281 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50888.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||
| Length | 466 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLNTTCIFF LNQPKQTLST LSLSDKFSSD SSRTHFQMSR QISGQPSRRL IVSNAASSPS LSGGFPDAGA HSKEEMEAET EQDPMNLADP DSCFCEFQGV 101: HIHHKVLDPH TLSDDVSNTS PHAQETPKTK FPMILLHGFG ASVFSWNRVM KPLARLVSSK VLAFDRPAFG LTSRIFHPFS GATNDAKPLN PYSMVYSVLT 201: TLYFIDVLAA DKAILVGHSA GCPVALDAYF EAPERVAALI LVAPAIFAPR PVATTDAGEN RDKEAPTSNF LGTLVELTKG VIRAVLRVVT GMANMLSSLY 301: KKALAAFLRS FLGVMLVRMA INKFGVTAVR NAWYDSKQVT DHVVQGYTKP LKAKGWDKAL VEFTVATLTD NNGSEKKLPL SKRLQEIKCP VLIVTGDTDR 401: IVPAWNAERL ARAIPGSVFE VIKKCGHLPQ EEKPDEFISI VAKFLGNAFG GSQQQDVDLK FQGIVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)