AT3G07980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.952 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : mitogen-activated protein kinase kinase kinase 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
mitogen-activated protein kinase kinase kinase 6 (MAPKKK6); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 7 (TAIR:AT3G13530.1); Has 136121 Blast hits to 133731 proteins in 5126 species: Archae - 192; Bacteria - 15089; Metazoa - 51503; Fungi - 13384; Plants - 33405; Viruses - 666; Other Eukaryotes - 21882 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2543893..2551092 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 151146.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1367 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MARQMTSSQF HKSKTLDNKY MLGDEIGKGA YGRVYIGLDL ENGDFVAIKQ VSLENIGQED LNTIMQEIDL LKNLNHKNIV KYLGSLKTKT HLHIILEYVE 0101: NGSLANIIKP NKFGPFPESL VTVYIAQVLE GLVYLHEQGV IHRDIKGANI LTTKEGLVKL ADFGVATKLN EADFNTHSVV GTPYWMAPEV IELSGVCAAS 0201: DIWSVGCTII ELLTCVPPYY DLQPMPALYR IVQDDTPPIP DSLSPDITDF LRLCFKKDSR QRPDAKTLLS HPWIRNSRRA LRSSLRHSGT IRYMKETDSS 0301: SEKDAEGSQE VVESVSAEKV EVTKTNSKSK LPVIGGASFR SEKDQSSPSD LGEEGTDSED DINSDQGPTL SMHDKSSRQS GTCSISSDAK GTSQDVLENH 0401: EKYDRDEIPG NLETEASEGR RNTLATKLVG KEYSIQSSHS FSQKGEDGLR KAVKTPSSFG GNELTRFSDP PGDASLHDLF HPLDKVPEGK TNEASTSTPT 0501: ANVNQGDSPV ADGGKNDLAT KLRARIAQKQ MEGETGHSQD GGDLFRLMMG VLKDDVLNID DLVFDEKVPP ENLFPLQAVE FSRLVSSLRP DESEDAIVTS 0601: SLKLVAMFRQ RPGQKAVFVT QNGFLPLMDL LDIPKSRVIC AVLQLINEIV KDNTDFLENA CLVGLIPLVM SFAGFERDRS REIRKEAAYF LQQLCQSSPL 0701: TLQMFISCRG IPVLVGFLEA DYAKHREMVH LAIDGMWQVF KLKKSTSRND FCRIAAKNGI LLRLVNTLYS LSEATRLASI SGDALILDGQ TPRARSGQLD 0801: PNNPIFSQRE TSPSVIDHPD GLKTRNGGGE EPSHALTSNS QSSDVHQPDA LHPDGDRPRL SSVVADATED VIQQHRISLS ANRTSTDKLQ KLAEGASNGF 0901: PVTQPDQVRP LLSLLEKEPP SRKISGQLDY VKHIAGIERH ESRLPLLYAS DEKKTNGDLE FIMAEFAEVS GRGKENGNLD TAPRYSSKTM TKKVMAIERV 1001: ASTCGIASQT ASGVLSGSGV LNARPGSTTS SGLLAHALSA DVSMDYLEKV ADLLLEFARA ETTVKSYMCS QSLLSRLFQM FNRVEPPILL KILECTNHLS 1101: TDPNCLENLQ RADAIKQLIP NLELKEGPLV YQIHHEVLSA LFNLCKINKR RQEQAAENGI IPHLMLFVMS DSPLKQYALP LLCDMAHASR NSREQLRAHG 1201: GLDVYLSLLD DEYWSVIALD SIAVCLAQDV DQKVEQAFLK KDAIQKLVNF FQNCPERHFV HILEPFLKII TKSSSINKTL ALNGLTPLLI ARLDHQDAIA 1301: RLNLLKLIKA VYEKHPKPKQ LIVENDLPQK LQNLIEERRD GQRSGGQVLV KQMATSLLKA LHINTIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)