AT3G05130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.720 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1433475..1435379 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 73271.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.81 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||
| Length | 634 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKKKASRNS NDTANDNRQQ QHDQKAPETD KKATVLSRQS SMEEHDSSEE QFQNLKSLNA MLLKQAMEKR NQIDSLVQAK DELETELARY CQEKTGLRDE 101: LDQVSDENFG LKFELDFVIV FVESQFREMC VGVDMLVKEK SDRESEIRVL KGEAIELTGK VEIEKEQLRK VCDERDLIKN GFDLQHEEVN RLKECVVRLE 201: EKESNLEIVI GKLESENERL VKERKVREEE IEGVKKEKIG LEKIMEEKKN EIDGLKREIK VLLSEKNEME IVKIEQKGVI EELERKLDKL NETVRSLTKE 301: EKVLRDLVIG LEKNLDESME KESGMMVEID ALGKERTIKE SEVERLIGEK NLIEKQMEML NVQSSDKGKL IDQLSREKVE LEERIFSRER KLVELNRKAD 401: ELTHAVAVLQ KNCDDQTKIN GKLSCKVDQL SNALAQVELR REEADKALDE EKRNGEDLKA EVLKSEKMVA KTLEELEKVK IERKSLFSAK NDLESQSESL 501: KSENVKLEKE LVELRKAMEA LKTELESAGM DAKRSMVMLK SAASMLSQLE NREDRLISEE QKREIGTEPY AMELESIEKA FKNKEDIIEE MKKEAEIMKQ 601: STEEAHKKQT FWTLVSSVTT VFAAASFAYA ARAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)