AT3G05100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 105 Blast hits to 105 proteins in 44 species: Archae - 2; Bacteria - 62; Metazoa - 0; Fungi - 5; Plants - 26; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1424155..1425667 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37720.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||
| Length | 336 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE 101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH 201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC 301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)