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AT3G02360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (peroxisomal marker)

At3g-GFP-02360
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 6-phosphogluconate dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02360-MONOMERBioCyc:ARA:GQT-1389-MONOMERBioGrid:6496EC:1.1.1.44
eggNOG:COG0362eggNOG:KOG2653EMBL:AC068900EMBL:AF424591
EMBL:AK227160EMBL:AY087341EMBL:BT002299EMBL:CP002686
EnsemblPlants:AT3G02360EnsemblPlants:AT3G02360.1EnsemblPlants:AT3G02360.2entrez:821163
Gene3D:1.10.1040.10Gene3D:1.20.5.320Gene3D:3.40.50.720GeneID:821163
Genevisible:Q9FWA3GO:GO:0004616GO:GO:0005777GO:GO:0005829
GO:GO:0006098GO:GO:0009570GO:GO:0009651GO:GO:0019521
Gramene:AT3G02360.1Gramene:AT3G02360.2gramene_pathway:1.1.1.44gramene_pathway:OXIDATIVEPENT-PWY
hmmpanther:PTHR11811hmmpanther:PTHR11811:SF33HOGENOM:HOG000255147InParanoid:Q9FWA3
InterPro:IPR006113InterPro:IPR006114InterPro:IPR006115InterPro:IPR006183
InterPro:IPR008927InterPro:IPR012284InterPro:IPR013328InterPro:IPR016040
iPTMnet:Q9FWA3KEGG:00030+1.1.1.44KEGG:00480+1.1.1.44KEGG:ath:AT3G02360
KO:K00033OMA:AFHTEWFPaxDb:Q9FWA3Pfam:PF00393
Pfam:PF03446Pfam:Q9FWA3PhylomeDB:Q9FWA3PIRSF:PIRSF000109
PRIDE:Q9FWA3PRINTS:PR00076PRO:PR:Q9FWA3ProteinModelPortal:Q9FWA3
Proteomes:UP000006548Reactome:R-ATH-71336RefSeq:NP_186885.1RefSeq:NP_850502.1
SMART:SM01350SMR:Q9FWA3STRING:3702.AT3G02360.1SUPFAM:SSF48179
SUPFAM:SSF51735TAIR:AT3G02360TIGRfam:TIGR00873TIGRFAMs:TIGR00873
UniGene:At.16821UniPathway:UPA00115UniProt:Q9FWA3
Coordinates (TAIR10) chr3:+:482498..483958
Molecular Weight (calculated) 53580.20 Da
IEP (calculated) 7.49
GRAVY (calculated) -0.28
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)