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AT3G01360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.696
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Family of unknown function (DUF716)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Family of unknown function (DUF716) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 208 Blast hits to 208 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJEAeggNOG:ENOG4111Y08EMBL:AC010676EMBL:AK229512
EMBL:BT011731EMBL:CP002686EnsemblPlants:AT3G01360EnsemblPlants:AT3G01360.1
EnsemblPlants:AT3G01360.2entrez:821158GeneID:821158GO:GO:0016021
Gramene:AT3G01360.1Gramene:AT3G01360.2hmmpanther:PTHR16007hmmpanther:PTHR16007:SF9
HOGENOM:HOG000077720InterPro:IPR006904KEGG:ath:AT3G01360OMA:CRTHEDY
PANTHER:PTHR16007Pfam:PF04819PhylomeDB:Q9SRI3Proteomes:UP000006548
RefSeq:NP_001030617.1RefSeq:NP_186785.1TAIR:AT3G01360TMHMM:TMhelix
UniGene:At.41288UniProt:Q9SRI3
Coordinates (TAIR10) chr3:-:137772..138731
Molecular Weight (calculated) 34764.70 Da
IEP (calculated) 6.62
GRAVY (calculated) 0.23
Length 319 amino acids
Sequence (TAIR10)
(BLAST)
001: MGILSYAVAG GGFAVIGAWE SLDSSNLDPN SSSGTADSSS PMAQIRASPP KSVGSSSIPV ALLSSLFIAN SFFSFFSSIG SRDRVGSMIQ LQIVAVAVLF
101: LYYAILTYLV NSKNAVFVAL PSSITTLLLL FGFIEEFLMF YLQKKDVSGI ENRYYDLMLV PIAICVFSTV FELKSDSSTH RFAKLGRGIG LILQGTWFLQ
201: MGVSFFTGLI TNNCTFHEKS RGNFTIKCKG HGDYHRAKAI ATLQFNCHLA LMVVVATGLF SVIANKNGYL RQDHSKYRPL GAELENLSTF TLDSDEEDEV
301: REESNVAKEV GLNGNSSHD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)