AT2G45590.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:18786725..18788776 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75558.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 683 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSRLSPPDI PPLQPTPTVS DGHHRFQTLP LIIAGSLTLT GVLLILVTLL IYRRLYRNRT APSDLISNSK SPQHYQCRRF SYSQLRRATN SFSESTHLGH 101: GGFGSVYKAD FPSGGDSLAV KVMDTSAGSL QGEREFHNEL SLSSHLIGSP HVVSLLGFSS DRRGRKLILV YELMANRSLQ DALLDRKCVE LMDWNKRFEI 201: ATDIAKGIEF LHHCCDPIII HGDIKPSNIL LDSDFKAKIG DFGLARVKSE DFDTRILIEE EDKSKDVVED NGSILEETES VITVFEEGNN VVNLSPETCG 301: ISVLTETVAS PGEKSGLSPE NCAVSILTVE VGAASPAMAS IPSPETCAIS VLTDTGLSPE SSKLKVGSKR DWWWKQDNNG GSRGGIESGS VKDYVMEWIG 401: SEIKKERPSN NKEWINNGDG SSSVSKKKKK EKKRKPREWW KEEFCEELTR KKRKKKKKKK RGLSSISSID SWFHRDDGAS SVHDHNLNPT KRKKRNSIDW 501: WVDGLSGELK SVMGKKNSQD SGLWCDVNVQ KSGGVSSTPS MRGTVCYIAP ECGGGGVLSE KCDVYSFGVL LLVLVSGRRP LQVTASPMSE FERANLISWA 601: KQLACNGKLL ELVDKSIHSL EKEQAVLCIT IALLCLQRSP VKRPTMKEIV EMLSGVSEPP HLPFEFSPSP PMGFPFKSRK KAR |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)