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AT3G15095.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXIZeggNOG:ENOG410YQ1AEMBL:AP000370EMBL:AP001299
EMBL:BT000948EMBL:CP002686EMBL:HM748832EnsemblPlants:AT3G15095
EnsemblPlants:AT3G15095.1entrez:820740ExpressionAtlas:Q9LIM5GeneID:820740
GO:GO:0009507GO:GO:0010207Gramene:AT3G15095.1hmmpanther:PTHR33448
hmmpanther:PTHR33448:SF1HOGENOM:HOG000064610ncoils:CoilOMA:ECKEQAR
PhylomeDB:Q9LIM5Proteomes:UP000006548RefSeq:NP_188128.1STRING:3702.AT3G15095.1
TAIR:AT3G15095UniGene:At.43799UniProt:Q9LIM5
Coordinates (TAIR10) chr3:+:5081996..5084050
Molecular Weight (calculated) 75581.60 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.77
Length 684 amino acids
Sequence (TAIR10)
(BLAST)
001: MAETERPHRS SSINSSSNNN SGSSTDLFIC FTSRFSSSSS MRLSSKSIHS PARSACLTTS LSRRLRTSGS LKNASAGVLN SPMFGANGGR KRSGSGYENS
101: NNNNNNNIEP SSPKVTCIGQ VRVKTRKHVK KKMRARSRRK GGENSFRRSV DQNDGGGGCR FKASENRLVH LPVTICESLR SFGSELNCFF PCRSSCTENS
201: HGDGRRAESN NDGCGGGGGG SNSCGAVFTR WFVAVEETSG GKRREIELVV GGEDEVEEDR RRSRRRHVFE GLDLSEIEMK TEKKERGEEV GRMSICSPPK
301: NALLLMRCRS DPVKVAALAN RVRERQLSLN DGVYTEEEED ERRRRFELEI EDKKRIDLCE KWISGETTVE TEEVSVAVAE AEAEAEAEAP LPSNPATEEE
401: ERVKVVEDSI VEEEQEASKI LDSFEEEIEA TIMKKIEDEI RNAIEEEEKL AEMEELAVVA VAETEEVEES KEVVPDCIPQ NEERSEQGNR EPDPSPEVVM
501: RRSLQEETTE KEKTTATPYK VLPDCLLLMM CEPKLSMEVS KETWVCSTDF VRCLPGRPPA KKIPPEAVGD NHHHHQPKKR IVTAVDSNAS SRRRSIDRPP
601: LHLQPPRSSC SYPAAPPIIT AAAAVGEQRV AGANKVQPPV LPRCKSEPRK SASKLAPEAC FWKNRKLEPH PPATVGVGGA GVGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)