AT2G45480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : growth-regulating factor 9 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18745583..18747403 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48610.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.18 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||||||||||||||
| Length | 429 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQSPKMEQEE VEEERMRNKW PWMKAAQLME FRMQALVYRY IEAGLRVPHH LVVPIWNSLA LSSSSNYNYH SSSLLSNKGV THIDTLETEP TRCRRTDGKK 101: WRCSNTVLLF EKYCERHMHR GRKRSRKLVE SSSEVASSST KYDNTYGLDR YNESQSHLHG TISGSSNAQV VTIASLPSAR SCENVIRPSL VISEFTNKSV 201: SHGRKNMEMS YDDFINEKEA SMCVGVVPLQ GDESKPSVQK FFPEVSDKCL EAAKFSSNRK NDIIARSREW KNMNVNGGLF HGIHFSPDTV LQERGCFRLQ 301: GVETDNEPGR CRRTDGKKWR CSKDVLSGQK YCDKHMHRGM KKKHPVDTTN SHENAGFSPL TVETAVRSVV PCKDGDDQKH SVSVMGITLP RVSDEKSTSS 401: CSTDTTITDT ALRGEDDDEE YLSLFSPGV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)