AT2G45450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.509 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein binding | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
ZPR1, a small leucine zipper-containing protein that interacts with REV HD-ZIPIII and is involved in the establishment of leaf polarity. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
LITTLE ZIPPER 1 (ZPR1); BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT3G60890.2); Has 84 Blast hits to 84 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18733548..18734058 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 16256.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 11.00 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||||||||||
| Length | 136 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQREHKTHNK LSFIYITPLY ISPINQTRLT YLSSSFLLSS SSKMCLSSSE TFSDTPTRLV LYLKTQSHVR IPRLSRRRRM WREEKKMEMI NLKLYVENQN 101: IIRENEKLKK KALLLHQENK TLFSLLQTKK LSSVHK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)