AT2G39445.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.940 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: PIG-P (InterPro:IPR013717), Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (InterPro:IPR016542); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (TAIR:AT1G61280.1); Has 338 Blast hits to 338 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 94; Plants - 57; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16470025..16471125 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20286.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.81 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 181 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPAKVSSFD QNIEEAHSVS SPRRVLSFSK RNKQKPGFQD TDSRRSSSFR ASEVHGPKPS EVYGFVGSIS TVVATVIFLV WAYVPDKLLE SIGIHYYPSR 101: YWVLAMPTYL MVTLMLALAF YIGLNFIATP PPTSLNTLFD EYSREPGEFA AGMEEGEDRP IDPISDIDIT RINDLMFNSS D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)