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AT2G31725.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic protein of unknown function (DUF842)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT1G05730.1); Has 259 Blast hits to 259 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111PBHeggNOG:KOG3377EMBL:AC006533EMBL:AC007071
EMBL:AY086445EMBL:CP002685EnsemblPlants:AT2G31725EnsemblPlants:AT2G31725.1
entrez:817729GeneID:817729Gramene:AT2G31725.1hmmpanther:PTHR21096
HOGENOM:HOG000272688InterPro:IPR008560KEGG:ath:AT2G31725OMA:NEMESCV
PANTHER:PTHR21096Pfam:PF05811PhylomeDB:Q8RV68Proteomes:UP000006548
RefSeq:NP_565729.1STRING:3702.AT2G31725.1TAIR:AT2G31725UniGene:At.38181
UniProt:Q8RV68
Coordinates (TAIR10) chr2:-:13486447..13487391
Molecular Weight (calculated) 17488.80 Da
IEP (calculated) 6.35
GRAVY (calculated) -0.61
Length 149 amino acids
Sequence (TAIR10)
(BLAST)
001: MDHIAAAEEQ IVSERLRRKL EEVNVAAQTQ LSPIQDHINF TLQQAYFKCA YECFDRRRKQ EEISNCVEHC SVPVVKSQQY FENEMAQFQE RLNRSLVVCQ
101: DKFEASKLQK IRPEAVNEME SCVHKSIEEN LNTLPHIVQR MKTAFNITN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)