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AT2G30600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : BTB/POZ domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ fold (InterPro:IPR011333), Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 6426 Blast hits to 6100 proteins in 155 species: Archae - 0; Bacteria - 3; Metazoa - 5211; Fungi - 25; Plants - 879; Viruses - 36; Other Eukaryotes - 272 (source: NCBI BLink).
Protein Annotations
EMBL:AK175155EMBL:AK176077EMBL:AK176544EMBL:AK221285
EMBL:AK318648EMBL:AY085216EMBL:CP002685EMBL:U93215
EnsemblPlants:AT2G30600EnsemblPlants:AT2G30600.1EnsemblPlants:AT2G30600.2EnsemblPlants:AT2G30600.3
EnsemblPlants:AT2G30600.4entrez:817610ExpressionAtlas:Q8LEV3Gene3D:2.60.120.260
GeneID:817610Genevisible:Q8LEV3GO:GO:0016567hmmpanther:PTHR24413
hmmpanther:PTHR24413:SF79HOGENOM:HOG000083961InParanoid:Q8LEV3InterPro:IPR000210
InterPro:IPR000421InterPro:IPR008979InterPro:IPR011333InterPro:IPR011705
InterPro:IPR022041iPTMnet:Q8LEV3KEGG:ath:AT2G30600Pfam:PF00651
Pfam:PF00754Pfam:PF07707Pfam:PF12248Pfam:Q8LEV3
Pfscan:PS50097PhylomeDB:Q8LEV3PIR:D84710PIR:E84710
PRIDE:Q8LEV3PRO:PR:Q8LEV3PROSITE:PS50097ProteinModelPortal:Q8LEV3
Proteomes:UP000006548RefSeq:NP_001031447.1RefSeq:NP_001031448.1RefSeq:NP_180618.2
RefSeq:NP_850151.1SMART:SM00225SMART:SM00875SMR:Q8LEV3
SUPFAM:SSF49785SUPFAM:SSF54695TAIR:AT2G30600UniGene:At.38344
UniGene:At.66362UniPathway:UPA00143UniProt:Q8LEV3
Coordinates (TAIR10) chr2:+:13037410..13041475
Molecular Weight (calculated) 92179.80 Da
IEP (calculated) 6.00
GRAVY (calculated) -0.19
Length 809 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAAKENKFL TVAPFECAWS DDLKFREAGR GCVAFDAFAH NDVTVVFREN VGTQHYHYKK DNSPHYIVII GSNRNRRLKI QVDGKSVVDE EASDLCRCSL
101: EFQSYWISIY DGLISIGKGR YPFQNLVFKW QDPKPNCNVQ YVGLSSWDKH VGYRNVSVFP VTHNHILLWK QVDCREVRGD ESGDEKVVEE GTGYDYEQWG
201: LGNFLESWQL SDTVFLVGEE EMDVPAHKVI LQASGNFPLR SSDGDVIQLR GVSYPILHAL LQYIYTGRTQ ILESELAPLR DLSSKFEVMS LVRQCEESID
301: HFKLSKTAFD SCRKVKLLCP ISHPLSGFMF PSAFPVDVGK LVKLYSTGEY SDIKIYLSDH SLTFQSHKVI LSLWSVAFAK MFTNGMSESH SSTIYLTDVS
401: PEAFKAMMNF MYSGELNMED TVNFGTELIH LLFLADRFGV VPLHQECCKM LLECLSEDSV CSVLQVVSSI SSCKLIEEMC KRKFSMHFDY CTTASLDFVL
501: LDQTTFSDIL ESADLTVTSE EKILNAVLMW CMKAEESHSW GVIDEMMNYA DPKSLFKERL QSLDDLLPHV RFSLLPYELL KRLENSNLSK EIPVFNRLLK
601: EAASFLTSGL ISPGNEPISR FQHRRSSFKE LQYIRDGDSN GVLHFVGTSY GSHQWVNPVL AKKINITSSS PTSRFTDPKA LASKAYAGTS FAGPRMEDGH
701: ISSWWVVDLG EEHQLMCNYY TFRQDGSRAF TRFWKFQGSM DGKTWTDLRV HEDDQTMCKA GQFASWPITA ANALLPFRFF RLVLTGPTAD TSTPWNFCIC
801: YLELYGYFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)