AT2G29720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes CTF2B. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CTF2B; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 10342 Blast hits to 10313 proteins in 1526 species: Archae - 25; Bacteria - 6467; Metazoa - 115; Fungi - 1794; Plants - 596; Viruses - 0; Other Eukaryotes - 1345 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12700592..12702289 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46887.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.00 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 427 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLVRPIYPF LARSKRWFPV RTGLKSVCLT TTRAETSGVD REEKVVIVGG GIGGLATAVA LHRLGIRSVV LEQAESLRTG GASLTLSKNG WRVLDAISIG 101: PQLRKQFLEM QGVVLKKEDG RELRSFKFKD NDQSQEVRGV ERRVLLETLA SQLPPQTIRF SSKLESIQSN ANGDTLLQLK DGTRFLANIV IGCDGIRSKV 201: ATWMGFSEPK YVGYCAFRGL GFFPNGQPFQ QKVNYIFGRG LRAGYVPVSA TKVYWFITFN SPSLGPQMMD PAILRKEAKE LVSTWPEDLQ NLIDLTPDEA 301: ISRTPLADRW LWPGIAPSAS KGRVVLVGDA WHPMTPNLGQ GACCALEDSV LLANKLASAI NGGTESVEGA MESYRSERWS QVFRLTVLAN LVGKLLQSDN 401: PLVCSVRDNI VSAMGKSSRT NDGTHKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)