AT2G22730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.902 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G65687.1); Has 17716 Blast hits to 17664 proteins in 2057 species: Archae - 323; Bacteria - 13331; Metazoa - 891; Fungi - 1841; Plants - 194; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9660964..9663972 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55670.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.92 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.52 | ||||||||||||||||||||||||||||||||||||||||
| Length | 510 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVTKEEDCLP PVTETTSRCY STSSSTPLAE LETVRSLEIV ESSSSLSPVW LLVIFCIINL LNYMDRGAIA SNGVNGSTRS CNDKGKCTLA TGIQGHFNLS 101: NFEDGVLSSS FMVGLLIASP IFASLAKRLI GVGLTVWTIA VLGCGSSFAF WFIVLCRMFV GVGEASFISL AAPFIDDNAP QEQKAAWLGL FYMCIPSGVA 201: LGYVYGGYVG KHFSWRYAFW GEAVLMAPFA VLGFLMKPLQ LKGSETLKNN NRLQVDNEIE HDQFEVSIET SKSSYANAVF KSFTGFAKDM KVLYKEKVFV 301: VNVLGYVSYN FVIGAYSYWG PKAGYNIYKM KNADMIFGAV TIICGIVGTL SGGFILDRVT ATIPNAFKLL SGATFLGAVF CFTAFTLKSL YGFIALFALG 401: ELLVFATQAP VNYVCLHCVK PSLRPLSMAI STVAIHIFGD VPSSPLVGIV QDHINSWRKT TLILTSILFL AAAIWFIGKI NLNSFYSNDE SFLVQIKLFV 501: ANLCFCKGYS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)