AT2G19400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.755 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G33080.1); Has 103456 Blast hits to 101588 proteins in 3064 species: Archae - 123; Bacteria - 12796; Metazoa - 37501; Fungi - 11276; Plants - 22937; Viruses - 407; Other Eukaryotes - 18416 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8399523..8402481 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60662.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.96 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 527 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENQEEDEVV LAKVTSEVED NFEDEGLVSN STLEKVAAAK KYIENHYNRR MRHIQQRKER RWVLEQKIAS LDVSEKEQLE LLEDLQRKET EYTRLMRNRL 101: CVDDFDLLSI IGRGAFGEVR LCREKKTGNI YAMKKLKKSE MLSRGQVEHV RAERNLLAEV ASDCIVKLYY SFQDPEYLYL IMEYLSGGDV MTLLMREETL 201: TETVARFYIA QSVLAIESIH KHNYVHRDIK PDNLLLDKYG HMKLSDFGLC KPLDCRNISA MNVNEPLNDE NINESIDGDE NCSIGRRGRR WKSPLEQLQH 301: WQINRRKLAY STVGTPDYIA PEVLLKKGYG VECDWWSLGA IMYEMLVGYP PFYSDDPVTT CRKIVSWRTH LVFPEGARLT PEARDLICRL LCDSEHRLGS 401: HGAGAEQIKA HTWFKDVEWE KLYEMDAAFK PVVNGELDTQ NFMKFDEVEC PKPARTGSGP SWKVSITPQN INFVGYTYRN FDAVRGSRHS LDIKGSVSPP 501: RSSTDSTRSD SAIDYTKLST GGDGSQQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)