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AT2G14260.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.958
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proline iminopeptidase
Curator
Summary (TAIR10)
encodes proline iminopeptidase
Computational
Description (TAIR10)
proline iminopeptidase (PIP); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, proline iminopeptidase 1 (InterPro:IPR005944), Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 7088 Blast hits to 7086 proteins in 1443 species: Archae - 32; Bacteria - 5306; Metazoa - 56; Fungi - 142; Plants - 129; Viruses - 0; Other Eukaryotes - 1423 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G14260-MONOMERBioCyc:ARA:GQT-1502-MONOMEREC:3.4.11.5eggNOG:ENOG410IG32
eggNOG:ENOG410XPKQEMBL:AC006304EMBL:AY059916EMBL:AY114690
EMBL:CP002685EMBL:U72711EnsemblPlants:AT2G14260EnsemblPlants:AT2G14260.1
entrez:815913ESTHER:arath-pipExpressionAtlas:P93732Gene3D:3.40.50.1820
GeneID:815913Genevisible:P93732GO:GO:0004177GO:GO:0005829
GO:GO:0009507GO:GO:0016787hmmpanther:PTHR10992hmmpanther:PTHR10992:SF860
HOGENOM:HOG000171480InParanoid:P93732InterPro:IPR000073InterPro:IPR002410
InterPro:IPR005944InterPro:IPR029058KEGG:ath:AT2G14260KO:K01259
MEROPS:S33.001OMA:VSEMFPDPaxDb:P93732Pfam:P93732
Pfam:PF00561PhylomeDB:P93732PIR:E84515PRIDE:P93732
PRINTS:PR00111PRINTS:PR00793PRO:PR:P93732ProteinModelPortal:P93732
Proteomes:UP000006548RefSeq:NP_179037.2RefSeq:NP_973454.1SMR:P93732
STRING:3702.AT2G14260.1SUPFAM:SSF53474TAIR:AT2G14260tair10-symbols:PIP
TIGRfam:TIGR01249TIGRFAMs:TIGR01249UniGene:At.22017UniProt:P93732
Coordinates (TAIR10) chr2:-:6041441..6043869
Molecular Weight (calculated) 43061.10 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.37
Length 380 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLILASFSL APCFCVRFFP SNHNNLNLLF PGQRKIQVSC GGKSEVLKSD TMEPHEAETF VNKRTLYAPI EPYSSGNLKV SDVHTLYWEQ SGKPDGHPVV
101: FLHGGPGGGT APSNRRFFDP EFYRIVLFDQ RGAGKSTPHA CLEENTTWDL VNDIEKLREH LKIPEWLVFG GSWGSTLALA YSQSHPDKVT GLVLRGIFLL
201: RKKEIDWFYE GGAAAIYPDA WEEFRDLIPE NERGSSLVDA YHKRLNSDDL EIQYAAARAW TKWEMMTAYL RPNLENVQKA EDDKFSLAFA RIENHYFVNK
301: GFFPSDSHLL DNVDKIRHIK TTIVQGRYDV CCPMMSAWDL HKAWPEAELK IVYDAGHSAN EPGISAELVV ANEKMKALMG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)