AT2G01170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : bidirectional amino acid transporter 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:102364..104462 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55334.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.73 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 516 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLGGDQSFV PVMDSGQVRL KELGYKQELK RDLSVFSNFA ISFSIISVLT GITTTYNTGL RFGGTVTLVY GWFLAGSFTM CVGLSMAEIC SSYPTSGGLY 101: YWSAMLAGPR WAPLASWMTG WFNIVGQWAV TASVDFSLAQ LIQVIVLLST GGRNGGGYKG SDFVVIGIHG GILFIHALLN SLPISVLSFI GQLAALWNLL 201: GVLVLMILIP LVSTERATTK FVFTNFNTDN GLGITSYAYI FVLGLLMSQY TITGYDASAH MTEETVDADK NGPRGIISAI GISILFGWGY ILGISYAVTD 301: IPSLLSETNN SGGYAIAEIF YLAFKNRFGS GTGGIVCLGV VAVAVFFCGM SSVTSNSRMA YAFSRDGAMP MSPLWHKVNS REVPINAVWL SALISFCMAL 401: TSLGSIVAFQ AMVSIATIGL YIAYAIPIIL RVTLARNTFV PGPFSLGKYG MVVGWVAVLW VVTISVLFSL PVAYPITAET LNYTPVAVAG LVAITLSYWL 501: FSARHWFTGP ISNILS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)