AT1G77720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : putative protein kinase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a predicted protein kinase based on sequence similarity. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:29210730..29213877 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86381.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.89 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 777 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDREDNLPVQ PDKPPKSLVR PILNLETTSS SSSSSSSSPE LLRHLQAAFK RHRPLSKMQT TSIGPRRSVA PQRQASRNTR LVTAEGQRSQ DVVTLSQSLA 101: ANTLTQDTTN NLAITSVAGE SASITQPTVS EHFNPSDRQM DFGKSAVTSL ESNLDVQRKS QSLIGTSQDM EWDATNQAEA SHLDACIGSK HQNLPSVDSE 201: VSLKSEYKDS SSLAKIQGQL GEFPNFLNQP RTRCSAVGSS WATTTLIHSS SAPMLNATTH VSRSYVEADS NANPHAVQSQ GNLPSCCPSS KVSNILHPNK 301: DATASEMPAS TNDPEVRVKE TDTSKQQQIT TGLEAPVGSS IYGSDGQANA RLPEELHTSV SSQPQKSDKH EKVASSKGPS APRKRNYDPD LFFKVNGKLY 401: QRLGKIGSGG SSEVHKVISS DCTIYALKKI KLKGRDYATA YGFCQEIGYL KKLKGKTNII QLIDYEVTDK TLLQEVLNGT MSNKDGRVKE DGFIYMVLEY 501: GEIDLAHMLS QKWREIEGSD RTIDENWLRF YWQQILQAVN TIHEERIVHS DLKPANFLLV RGFLKLIDFG IAKAINSDTT NIQRDSQVGT LSYMSPEAFM 601: CNESDENGNT IKCGRPSDIW SLGCILYQMV YGRTPFADYK TFWAKFKVIT DPNHEITYNQ LSNPWLIDLM KKCLAWDRNQ RWRIPELLQH PFLAPPIPHE 701: PQVKTIKLFS LIAESCGSDD DKANSMISQL EQLLSNPAPL PRNDVLDSRD QNQQLLSRVS ELCIQLQDRL QGLEGEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)