AT1G76040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : calcium-dependent protein kinase 29 | ||||||||||||
| Curator Summary (TAIR10) |
member of Calcium Dependent Protein Kinase | ||||||||||||
| Computational Description (TAIR10) |
calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.2); Has 71074 Blast hits to 61991 proteins in 2513 species: Archae - 15; Bacteria - 1854; Metazoa - 30398; Fungi - 13026; Plants - 12160; Viruses - 42; Other Eukaryotes - 13579 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:28538906..28540448 | ||||||||||||
| Molecular Weight (calculated) | 37163.70 Da | ||||||||||||
| IEP (calculated) | 5.11 | ||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||
| Length | 323 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFECILAKTL VLYFEIRTSN HLIWLIFVGK VYRDIVGSAY YVAPEVLHRN YGKEIDVWSA GVMLYILLSG VPPFWGETEK TIFEAILEGK LDLETSPWPT 101: ISESAKDLIR KMLIRDPKKR ITAAEALEHP WMTDTKISDK PINSAVLVRM KQFRAMNKLK KLALKVIAEN LSEEEIKGLK QTFKNMDTDE SGTITFDELR 201: NGLHRLGSKL TESEIKQLME AADVDKSGTI DYIEFVTATM HRHRLEKEEN LIEAFKYFDK DRSGFITRDE LKHSMTEYGM GDDATIDEVI NDVDTDNDGR 301: INYEEFVAMM RKGTTDSDPK LIR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)