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AT1G75190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 7306 Blast hits to 3858 proteins in 279 species: Archae - 15; Bacteria - 134; Metazoa - 3314; Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes - 2862 (source: NCBI BLink).
Protein Annotations
EMBL:AC025814EMBL:AK317519EMBL:BT025494EMBL:CP002684
EnsemblPlants:AT1G75190EnsemblPlants:AT1G75190.1entrez:843856ExpressionAtlas:Q9FRL0
GeneID:843856Gramene:AT1G75190.1ncoils:CoilOMA:MGKRRFQ
PIR:B96782Proteomes:UP000006548RefSeq:NP_565104.1TAIR:AT1G75190
UniGene:At.34806UniGene:At.73053UniProt:Q9FRL0
Coordinates (TAIR10) chr1:+:28219598..28219993
Molecular Weight (calculated) 15488.80 Da
IEP (calculated) 5.10
GRAVY (calculated) -1.78
Length 131 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKRRFQKAK ETSSVAEASS PTESQATRRR RGRPRKNLEN PEDFKKEESE EDEDYEEYED EEEEDEEAEV VINREKLKKK VRSSSGSMEK EQKMKHEELE
101: EEEKPEMTVK VVVPPPSSRR SRRKSTPVKS W
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)