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AT1G75000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.980
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GNS1/SUR4 membrane protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT4G36830.1); Has 217 Blast hits to 217 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 53; Plants - 70; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRWTeggNOG:KOG3071EMBL:AC008263EMBL:AC013258
EMBL:CP002684EnsemblPlants:AT1G75000EnsemblPlants:AT1G75000.1entrez:843838
GeneID:843838GO:GO:0016021Gramene:AT1G75000.1hmmpanther:PTHR11157
hmmpanther:PTHR11157:SF11HOGENOM:HOG000244209InterPro:IPR002076KEGG:00062+2.3.1.199
KEGG:ath:AT1G75000OMA:VNFRWSPPANTHER:PTHR11157Pfam:PF01151
PhylomeDB:Q9S804PIR:H96779Proteomes:UP000006548RefSeq:NP_177637.1
STRING:3702.AT1G75000.1TAIR:AT1G75000TMHMM:TMhelixUniGene:At.50036
UniProt:Q9S804
Coordinates (TAIR10) chr1:+:28163650..28164586
Molecular Weight (calculated) 32129.70 Da
IEP (calculated) 10.46
GRAVY (calculated) 0.59
Length 281 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTFNYYLAE HPTIVNFRWS PTQSYASTWS FLFTAVSSYI IAAVTLHLLL LITLSLSNRR RGFSLGPIPA LHSLTISIIS AVIFVGILLS AAAEIRDTRW
101: LWRRTRTTAL QWFLCFPVGT RASGRVFFWS YAFYLSRFLH LFRTFFSVIR RRKLSFFQLI NQSSLLCISF LWLEYSQSFQ VVAILLTTVS YAVVYGYRFW
201: TEIGLRGACF PFVGNCQAIL LGCMTVCHVG VLCIHLVKRG GCNGIGAWLF NSVLNAVITL LYLKFYCKTR SMMTKANHNT T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)