suba logo
AT1G73320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G08125.1); Has 1545 Blast hits to 1542 proteins in 226 species: Archae - 0; Bacteria - 64; Metazoa - 464; Fungi - 508; Plants - 337; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISZ6eggNOG:ENOG410YC2PEMBL:AY800617EMBL:AY954773
EMBL:CP002684EnsemblPlants:AT1G73320EnsemblPlants:AT1G73320.1entrez:843666
ExpressionAtlas:Q5Q0D4Gene3D:3.40.50.150GeneID:843666GO:GO:0008168
Gramene:AT1G73320.1hmmpanther:PTHR14614hmmpanther:PTHR14614:SF33HOGENOM:HOG000030524
InterPro:IPR019410InterPro:IPR029063OMA:VVWDSGVPfam:PF10294
PhylomeDB:Q5Q0D4Proteomes:UP000006548RefSeq:NP_177475.3SMR:Q5Q0D4
SUPFAM:SSF53335TAIR:AT1G73320UniGene:At.50031UniProt:Q5Q0D4
Coordinates (TAIR10) chr1:-:27565728..27567206
Molecular Weight (calculated) 34377.00 Da
IEP (calculated) 4.53
GRAVY (calculated) -0.04
Length 316 amino acids
Sequence (TAIR10)
(BLAST)
001: MFGPSMHMEA AEIVHSAARF EAEKMGKEDE AVEEIRRMSG YGGDVIVVGG FPASESESES ESDLAAAEIM VIWAIQGPTS FAPNTLVAQS SLELRLDACG
101: HSLSILQSPC SLNTPGVTGS VMWDSGVVLG KFLEHSVDSK VLSLEGKKIV ELGSGCGLVG CIAALLGGNA VLTDLPDRLR LLKKNIQTNL HRGNTRGSAI
201: VQELVWGDDP DPDLIEPFPD YVLGSDVIYS EEAVHHLVKT LLQLCSDQTT IFLSGELRND AVLEYFLETA LKDFAIGRVE QTQWHPDYRS HRVVLYVLEK
301: KSKRCLADES SLNQSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)