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AT1G72640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); Has 524 Blast hits to 518 proteins in 133 species: Archae - 12; Bacteria - 289; Metazoa - 6; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHSVeggNOG:ENOG4112BM2EMBL:BT011739EMBL:CP002684
EnsemblPlants:AT1G72640EnsemblPlants:AT1G72640.1entrez:843596ExpressionAtlas:Q6NMC1
Gene3D:3.40.50.720GeneID:843596GO:GO:0009507GO:GO:0009535
Gramene:AT1G72640.1hmmpanther:PTHR14194hmmpanther:PTHR14194:SF44HOGENOM:HOG000265886
InterPro:IPR016040OMA:AFICVEAPfam:PF13460PhylomeDB:Q6NMC1
Proteomes:UP000006548RefSeq:NP_177408.3STRING:3702.AT1G72640.1SUPFAM:SSF51735
TAIR:AT1G72640UniGene:At.35075UniProt:Q6NMC1
Coordinates (TAIR10) chr1:-:27346409..27348147
Molecular Weight (calculated) 33637.10 Da
IEP (calculated) 5.33
GRAVY (calculated) -0.27
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGTSLPSCL LSQGPSLLFS SSNQDSEANK CRIGITSGKR CLVRCFAKKK ISFVDQILDY IEGGPKLRKW YGAPELRPKD GSLSGDDDEF EAEEKEDDLD
101: GEKDVVFVTD GDSDLGQMII LQLIVKGTRV KALVKDKRKA LEAFGSYVEL TTGDASDERF LKKAFKGVGA VISPTEGFLS IVKSFRGVKH AVLLSQLSVY
201: ESSGGIQAMM NSKAKKLAEQ DENAAISSNV PYTIIRTGKL ENSPGGSQGF NFSAGAAAKG SISKEDAARI CVEALSVIPP TGLIFEVTNG EEVVSDWEGQ
301: LMKVMQRQSD KK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)