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AT1G66900.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF818 (InterPro:IPR008536); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G38220.3); Has 3645 Blast hits to 3636 proteins in 755 species: Archae - 4; Bacteria - 1186; Metazoa - 604; Fungi - 183; Plants - 290; Viruses - 6; Other Eukaryotes - 1372 (source: NCBI BLink).
Protein Annotations
DNASU:843008eggNOG:COG1073eggNOG:KOG1552EMBL:AY070046
EMBL:AY117305EMBL:CP002684EnsemblPlants:AT1G66900EnsemblPlants:AT1G66900.1
entrez:843008ESTHER:arath-AT1G66900Gene3D:3.40.50.1820GeneID:843008
GO:GO:0016787Gramene:AT1G66900.1hmmpanther:PTHR12277hmmpanther:PTHR12277:SF83
HOGENOM:HOG000007142InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT1G66900
MEROPS:S09.A34OMA:TGQASECPfam:PF12146Pfam:PF12695
PhylomeDB:Q8VYT1Proteomes:UP000006548RefSeq:NP_176862.2SUPFAM:SSF53474
TAIR:AT1G66900UniGene:At.28422UniProt:Q8VYT1
Coordinates (TAIR10) chr1:+:24959552..24961255
Molecular Weight (calculated) 30208.10 Da
IEP (calculated) 6.76
GRAVY (calculated) -0.19
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGVTSSIAA KFAFFPPTPP SYEVIADDSC GGRLYIPEIP RRDDVDILKL RTRCGNEIVA VYVKHSKANG TLLYSHGNAA DLGQMFELFV ELSNRLRVNL
101: MGYDYSGYGQ STGQASECNT YADIEASYKC LKEKYGVKDD QLIVYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VTCPVLVIHG TADEVVDWSH GKRLWELSKE KYEPLWISGG GHCDLELYPD FIRHLKKFVV SLGNKQAEQA PT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)