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AT1G65390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phloem protein 2 A5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phloem protein 2 A5 (PP2-A5); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2-A6 (TAIR:AT5G45080.1); Has 2031 Blast hits to 1936 proteins in 66 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:28072DNASU:842851EMBL:AC004512EMBL:AF325110
EMBL:AF528686EMBL:AF528687EMBL:AF528688EMBL:AF528689
EMBL:AF528690EMBL:AF528691EMBL:AF528692EMBL:AF528693
EMBL:AF528694EMBL:AF528695EMBL:AF528696EMBL:AF528697
EMBL:AF528698EMBL:AF528699EMBL:AF528700EMBL:AF528701
EMBL:AF528702EMBL:AF528703EMBL:AF528704EMBL:AK176581
EMBL:CP002684EnsemblPlants:AT1G65390EnsemblPlants:AT1G65390.1entrez:842851
ExpressionAtlas:Q9C5Q9Gene3D:3.40.50.10140GeneID:842851Genevisible:Q9C5Q9
GO:GO:0007165GO:GO:0030246hmmpanther:PTHR32009hmmpanther:PTHR32009:SF6
InParanoid:Q9C5Q9InterPro:IPR000157InterPro:IPR025886KEGG:ath:AT1G65390
OMA:TITMHESPaxDb:Q9C5Q9Pfam:PF01582Pfam:PF14299
Pfam:Q9C5Q9Pfscan:PS50104PhylomeDB:Q9C5Q9PIR:T02363
PRIDE:Q9C5Q9PRO:PR:Q9C5Q9PROSITE:PS50104ProteinModelPortal:Q9C5Q9
Proteomes:UP000006548RefSeq:NP_176718.2SMART:SM00255SMR:Q9C5Q9
STRING:3702.AT1G65390.1SUPFAM:SSF52200TAIR:AT1G65390tair10-symbols:ATPP2-A5
tair10-symbols:PP2-A5UniGene:At.18976UniProt:Q9C5Q9
Coordinates (TAIR10) chr1:+:24292566..24294566
Molecular Weight (calculated) 47965.50 Da
IEP (calculated) 5.56
GRAVY (calculated) -0.30
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGASSVSSI CSSNVSLIPT GPQVFINFRG KDLRKGFMSF LKPALKKEKI NVFIDEQEER GKYLISLFDT IGESKIALVI FSEGYCESHW CMDELVKIKE
101: YMDQNRLIII PIFYRLDLDV VKDLTGKFGD NFWDLVDKYQ PEPKKLHKWT EALFSVCELF SLILPKHSDI SDRDFVKSIV KAVKKVQKNF FQRRNGEIEY
201: QDFSVPACKL TITMHESPNE EAVQVTVLNE FYQMKNQSPV PSYEFKFWVD LTRPKGNVFM IDARDLSIAW SEDSNHWTWL PLPNQNSNES VMEIAFLKSA
301: SWLDVAGKFD TRYLTPRTRY EVVFVVKLEY TFEWETLVKL KLDLPNTWEK PQEQSVDMFD YISDQWLDIP VGEFTTSKKN VGEISFAMYE HECQLWKSGL
401: FVKGVTIRPK Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)