suba logo
AT1G63050.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MBOAT (membrane bound O-acyl transferase) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G12640.1); Has 1074 Blast hits to 1071 proteins in 250 species: Archae - 0; Bacteria - 147; Metazoa - 624; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G63050-MONOMERBioGrid:27829EC:2.3.1.-EC:2.3.1.23
EC:2.3.1.n6EC:2.3.1.n7eggNOG:COG5202eggNOG:KOG2704
EMBL:AC010795EMBL:AY072080EMBL:AY122979EMBL:CP002684
EnsemblPlants:AT1G63050EnsemblPlants:AT1G63050.1entrez:842608GeneID:842608
Genevisible:Q9CAN8GO:GO:0005783GO:GO:0005789GO:GO:0006641
GO:GO:0008654GO:GO:0016021GO:GO:0016746GO:GO:0019375
GO:GO:0019432GO:GO:0045017GO:GO:0047184GO:GO:0071617
Gramene:AT1G63050.1gramene_pathway:2.3.1.51gramene_pathway:PWY-5667gramene_pathway:PWY0-1319
gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR13906hmmpanther:PTHR13906:SF4HOGENOM:HOG000265798
InParanoid:Q9CAN8InterPro:IPR004299KEGG:ath:AT1G63050KO:K13519
OMA:HYVYERIPaxDb:Q9CAN8Pfam:PF03062Pfam:Q9CAN8
PhylomeDB:Q9CAN8PIR:G96655PRIDE:Q9CAN8PRO:PR:Q9CAN8
Proteomes:UP000006548Reactome:R-ATH-1482788Reactome:R-ATH-1482801Reactome:R-ATH-1482839
Reactome:R-ATH-1482922RefSeq:NP_176493.1STRING:3702.AT1G63050.1TAIR:AT1G63050
TMHMM:TMhelixUniGene:At.27772UniProt:Q9CAN8
Coordinates (TAIR10) chr1:-:23376061..23378178
Molecular Weight (calculated) 52772.10 Da
IEP (calculated) 9.49
GRAVY (calculated) 0.38
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MELLDMNSMA ASIGVSVAVL RFLLCFVATI PISFLWRFIP SRLGKHIYSA ASGAFLSYLS FGFSSNLHFL VPMTIGYASM AIYRPLSGFI TFFLGFAYLI
101: GCHVFYMSGD AWKEGGIDST GALMVLTLKV ISCSINYNDG MLKEEGLREA QKKNRLIQMP SLIEYFGYCL CCGSHFAGPV FEMKDYLEWT EEKGIWAVSE
201: KGKRPSPYGA MIRAVFQAAI CMALYLYLVP QFPLTRFTEP VYQEWGFLKR FGYQYMAGFT ARWKYYFIWS ISEASIIISG LGFSGWTDET QTKAKWDRAK
301: NVDILGVELA KSAVQIPLFW NIQVSTWLRH YVYERIVKPG KKAGFFQLLA TQTVSAVWHG LYPGYIIFFV QSALMIDGSK AIYRWQQAIP PKMAMLRNVL
401: VLINFLYTVV VLNYSSVGFM VLSLHETLVA FKSVYYIGTV IPIAVLLLSY LVPVKPVRPK TRKEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)